CircRNA
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Related Links


1. CircRNA related databases
  • circBase: a database for circular RNAs.
  • circRNADb: A comprehensive database for human circular RNAs with protein-coding annotations.
  • CircNet: a database of circular RNAs derived from transcriptome sequencing data.
  • Circ2Traits: a comprehensive database for circular RNA potentially associated with disease and traits.
  • CircInteractome: A web tool for exploring circular RNAs and their interacting proteins and microRNAs.
  • TSCD: Tissue-Specific CircRNA Database.
  • CSCD: a database for cancer-specific circular RNAs.
2. miRNA related databases
  • miRBase: the microRNA database.
  • HMDD v2.0: a database for experimentally supported human microRNA and disease associations.
  • OncomiRDB: a database for the experimentally verified oncogenic and tumor-suppressive microRNAs.
  • dbDEMC 2.0: updated database of differentially expressed miRNAs in human cancers.
  • miR2Disease: a manually curated database for microRNA deregulation in human disease.
3. miRNA target related databases
  • TargetScan: Predicting effective microRNA target sites in mammalian mRNAs.
  • miRanda: mirSVR predicted target site scoring method.
  • miRTarBase: the experimentally validated microRNA-target interactions database.
  • miRecords: an integrated resource for microRNA-target interactions.


 

Maintained by Dongxia Yao - Pengyuan Liu's Lab -Zhejiang University

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